Please note: due to improvements in the
$cosmo and $cosmo_atoms can be set interactively with the COSMO input program COSMOPREP after the usual generation of the
TURBOMOLE input.
The COSMO energies and total charges are listed in the result section:
The dielectric energy of the system is already included in the total energy.
use_old_amat option can be used to calculate energies (not gradients)
using the old cavity algorithm.
The basic COSMO settings are defined in the $cosmo and the
$cosmo_atoms block.
Example with default values:
$cosmo
epsilon=infinity
nppa= 1082
nspa= 92
disex= 10.0000
rsolv= 1.30
routf= 0.85
cavity closed
ampran= 0.1D-04
phsran= 0.0
# the following options are not used by default
allocate_nps= 140
use_old_amat
All other parameters affect the generation of the surface
and the construction of the
defines a finite permittivity used for
scaling the screening charges.
skips the COSMO segment
statistics run and
allocates memory for the given number of segments.
If the $cosmo keyword is given without further specifications the
default parameter are used (recommended).
For the generation of the cavity, COSMO also requires the definition
of atomic radii, which must be provided in Ångstrom units in the
data group $cosmo_atoms, e.g. for a water molecule:
number of basis grid points per
atom
(allowed values:
number of segments per atom
(allowed values:
distance threshold for A matrix
elements (Ångstrom)
distance to outer solvent sphere
for cavity
construction (Ångstrom)
factor for outer cavity
construction in the outlying
charge correction
fill in seams between atoms with points
leave untidy seams between atoms
amplitude of the cavity
de-symmetrization
phase of the cavity
de-symmetrization
uses
$cosmo_atoms
# radii in Angstrom units
o 1 \
radius= 1.7200
h 2-3 \
radius= 1.3000
SCREENING CHARGE:
cosmo : -0.003925
correction : 0.003644
total : -0.000282
ENERGIES [a.u.]:
Total energy = -76.0296831863
Total energy + OC corr. = -76.0297567835
Dielectric energy = -0.0118029468
Diel. energy + OC corr. = -0.0118765440
The following value is included for downward compatibility
Total energy corrected = -76.0297199849
OC corr denotes the outlying charge correction. The last energy entry
gives the total outlying charge corrected energy in the old definition used in
TURBOMOLE 5.7 and older versions.
Subsections
Next: COSMO in MP2 Calculations:
Up: Format of Keywords and
Previous: Keywords for Periodic Electrostatic
Contents
Index
TURBOMOLE